Author

Piotr Jedryszek

University of Oxford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Aaron MaiwaldiD· 1 shared Bernhard SchölkopfiD· 1 shared Daniel CazaresiD· 1 shared Florent Draye· 1 shared Garrett M. MorrisiD· 1 shared Oliver M. CrookiD· 1 shared R. Craig MacLeaniD· 1 shared Weronika A SlesakiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

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1 shared paperGenomics

Aaron MaiwaldORCID

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2 papers

Recent·Most cited

Decode-gLM: A toolkit for interpreting, auditing, and steering genomic language models

Aaron Maiwald, Piotr Jedryszek, Florent Draye, Bernhard Schölkopf, Garrett M. Morris, Oliver M. Crook

This paper introduces Decode-gLM, a toolkit using sparse autoencoders to interpret, audit, and steer genomic language models, revealing biological features and identifying data contamination.

bioRxiv · Oct 31, 2025 · PreprintGenomics

Plasmids link antibiotic resistance genes and phage defense systems in E. coli

Weronika A Slesak, Piotr Jedryszek, Daniel Cazares, William Matlock, R. Craig MacLean

The paper analyzes 2,559 E. coli plasmids to show that antibiotic resistance genes and phage defense systems are physically linked, suggesting potential interactions between antibiotic use and phage therapy.

bioRxiv · Jul 25, 2025 · PreprintEvolutionary Biology