ECCFP: a consecutive full pass based bioinformatic analysis for eccDNA identification using Nanopore sequencing data
TangXuan Zhang, Wang Li, Qingsong Zen, Jun Zhang, Biyuan Miao, Mengting Li, Luo Juan, Tianliang Liu, Shifu Chen, Shaogui Wan
ECCFP is a bioinformatic pipeline for detecting eccDNA from long-read sequencing data, showing reduced false positives and higher sensitivity than existing methods.
bioRxiv · May 13, 2025 · PreprintBioinformatics