Author

R. Mazumder

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Scientific Communication & Education· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

B. Fochtman· 2 shared H. Morizono· 2 shared K. Krampis· 2 shared K. Smith· 2 shared N. Guimera· 2 shared V. Simonyan· 2 shared A. Bell· 1 shared A. C. Sylvetsky· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersScientific Communication & Education

B. Fochtman

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Author profile →

3 papers

Recent·Most cited

Communicating Regulatory High Throughput Sequencing Data Using BioCompute Objects

C. H. S. King, J. G. Keeney, N. Guimera, S. Das, R. Mazumder, B. Fochtman, S. Telawar, J. Patel, M. O. Walderhaug, E. F. Donaldson

The paper demonstrates that BioCompute Objects (BCOs) enable high concordance (99.15%) in replicating NGS analysis results across simulated regulatory submissions and reviews.

bioRxiv · Dec 7, 2020Scientific Communication & Education

Enabling Precision Medicine via standard communication of NGS provenance, analysis, and results

G. Alterovitz, D. A. Dean, C. Goble, M. R. Crusoe, S. Soiland-Reyes, A. Bell, A. Hayes, A. Suresh, A. Purkayastha, C. H. H. King, D. Taylor, E. Johanson, E. E. Thompson, E. Donaldson, H. Morizono, , R. Mazumder

The paper introduces the BioCompute framework to standardize genomic data reporting, enabling reproducibility and interoperability in precision medicine.

bioRxiv · Nov 5, 2018Scientific Communication & Education

Baseline human gut microbiota profile in healthy people and standard reporting template

C. H. King, H. Desai, A. C. Sylvetsky, J. LoTempio, S. Ayanyan, J. Carrie, K. Crandall, B. Fochtman, L. Gasparyan, N. Gulzar, P. Howell, N. Issa, K. Krampis, L. Mishra, H. Morizono, , R. Mazumder

The paper establishes a baseline human gut microbiota profile and provides a reference database and reporting tool for clinical and research applications.

bioRxiv · Oct 16, 2018Microbiology