Comparison of library preparation and sequencing depths for direct sequencing of Bordetella pertussis positive samples
W. Fong, K. Pey, R. Rockett, R. Sadsad, V. Sintchenko, V. Timms
This study evaluates WGS library preparation methods for direct sequencing of B. pertussis clinical samples, finding that the Illumina DNA prep kit with deep sequencing detects vaccine antigen variations and macrolide resistance.
bioRxiv · Feb 14, 2021 · PreprintMicrobiology