SPICE: A Robust Computational Framework for Identifying Copy Number Variations in Spatial Transcriptomics
Kalins Banerjee, Robert C. Langefeld, Evan T. Keller, Xiang Zhou
SPICE identifies somatic CNVs and ASCN profiles from spatial transcriptomics data by integrating gene expression, spatial coordinates, and SNPs to improve CNV detection accuracy.
bioRxiv · Jul 4, 2026 · PreprintGenomics