Author

Ruili Cao

Institute for Protein Innovation

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:protein sequence· 2 Research Focus:software / tool· 2 Research Focus:database / resource· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Organism:non-human primate· 1 Assay:protein structure· 1

Frequent Co-Authors

Andre A. R. TeixeiraiD· 2 shared Deepash KothiwaliD· 2 shared Haisun ZhuiD· 2 shared Allan A. MillsiD· 1 shared Hoan N. Nguyen· 1 shared Minh Anh Kieu· 1 shared Yang Su· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 18 mutual co-author links

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2 shared papersBioinformatics

Andre A. R. TeixeiraORCID

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2 papers

Recent·Most cited

OpenAntigens: a structure-aware database for antigen construct design across the human cell-surface and secreted proteome

Andre A. R. Teixeira, Haisun Zhu, Deepash Kothiwal, Ruili Cao, Allan A. Mills

A static web database proposes 55 305 construct suggestions for 5328 human secreted and cell-surface proteins, using AlphaFold pLDDT and PAE, with ortholog, paralog and BLAST cross-reactivity context.

Nucleic Acids Research · Oct 29, 2026Peer-reviewedBioinformatics✦ In-depth digest

An interpretable open platform for sequence-based antibody developability prediction

Hoan N. Nguyen, Deepash Kothiwal, Yang Su, Minh Anh Kieu, Ruili Cao, Haisun Zhu, Andre A. R. Teixeira

DELPHI is an open platform for predicting antibody developability from sequence, achieving high AUC scores and enabling residue-level engineering insights.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics