Author

Yang Su

Shanghai University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

Click to filter author papers

Systems Biology· 2 Bioinformatics· 1 Developmental Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 4 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Assay:protein sequence· 1

Frequent Co-Authors

Ping AoiD· 4 shared Ruiqi XiongiD· 4 shared Mengchao YaoiD· 3 shared Yong-Cong CheniD· 3 shared Andre A. R. TeixeiraiD· 1 shared Binglin ZhuiD· 1 shared Chen SuniD· 1 shared Deepash KothiwaliD· 1 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersSystems Biology

Ping AoORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

An interpretable open platform for sequence-based antibody developability prediction

Hoan N. Nguyen, Deepash Kothiwal, Yang Su, Minh Anh Kieu, Ruili Cao, Haisun Zhu, Andre A. R. Teixeira

DELPHI is an open platform for predicting antibody developability from sequence, achieving high AUC scores and enabling residue-level engineering insights.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics

Endogenous network modeling reveals mechanisms of repair Schwann cell decline and potential recovery targets

Zongyi Zhou, Ruiqi Xiong, Shunlian Fu, Yang Su, Qiang Ao, Yong-Cong Chen, Ping Ao

The paper constructs an endogenous regulatory network model of Schwann cell dedifferentiation and identifies potential therapeutic targets for nerve repair.

Biology · Jul 6, 2026Peer-reviewedNeuroscience

Quantitative Resolving Cell Fate in the Early Embryogenesis of Caenorhabditis elegans

Ruiqi Xiong, Yang Su, Mengchao Yao, Zefei Liu, Jie Lu, Yong-Cong Chen, Ping Ao

The paper constructs a model of the core endogenous network to simulate cell fate transitions in C. elegans embryogenesis and predicts AB cell transdifferentiation trajectories.

bioRxiv · Oct 25, 2024 · PreprintDevelopmental Biology

Energy Landscape near Glioma Decipher the Role of Glioma Stem Cell within Glioma Hierarchy

Mengchao Yao, Yang Su, Ruiqi Xiong, Xile Zhang, Zhu Xiao-mei, Yong-Cong Chen, Ping Ao

This study uses a network dynamics model to analyze glioma stem cells' role in glioma hierarchy, identifying stable states and transitional states linked to tumor heterogeneity and therapy resistance.

bioRxiv · Nov 24, 2023 · PreprintSystems Biology

Evolution of the Telencephalon Anterior-Posterior Patterning by Core Endogenous Network Bifurcation

Chen Sun, Mengchao Yao, Ruiqi Xiong, Yang Su, Binglin Zhu, Ping Ao

The paper explains the evolution of telencephalon anterior-posterior patterning through bifurcations in a gene network, supported by first-principle theory and experimental validation.

bioRxiv · Mar 30, 2023 · PreprintSystems Biology