Author

Søren Knudsen

Carlsberg Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:plant (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:development & morphogenesis· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Christoph DockteriD· 2 shared Magnus Wohlfahrt RasmusseniD· 2 shared Adam LampariD· 1 shared Ales PecinkaiD· 1 shared Alexander StriebeckiD· 1 shared Ana G. L. AssunçãoiD· 1 shared Anko Blaakmeer· 1 shared Anna NowickaiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersPlant Biology

Christoph DockterORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Temporal genomic imprinting regulates grain filling in barley

Martin Kovacik, Adam Lampar, Anna Nowicka, Marta Peirats-Llobet, Peter Šály, Kay Trafford, Zuzana Korchanová, Kateřina Kaduchová, Beáta Strejčková, Magnus Wohlfahrt Rasmussen, Søren Knudsen, Aparna Sreeprakash, Marie Červenková, Tereza Dobisová, Christoph Dockter, , Ales Pecinka

The paper identifies imprinted genes in barley endosperm and shows how LYS3 regulates grain filling through maternal and paternal allele expression.

bioRxiv · Nov 4, 2026 · PreprintPlant Biology

Point mutation in sensor triples zinc levels in Sorghum bicolor

Feixue Liao, Anko Blaakmeer, Søren Knudsen, Ana G. L. Assunção

The paper identifies a point mutation in the ZSM of sorghum bZIP19/23 homolog that increases seed zinc levels by three-fold without developmental issues.

bioRxiv · Dec 13, 2025 · PreprintPlant Biology

FIND-IT: Ultrafast mining of genome diversity

Søren Knudsen, Toni Wendt, Christoph Dockter, Hanne Cecilie Thomsen, Magnus Wohlfahrt Rasmussen, Morten Egevang Jørgensen, Qiongxian Lu, Cynthia Voss, Emiko Murozuka, Jeppe Thulin Østerberg, Jesper Harholt, Ilka Braumann, J.A. Cuesta-Seijo, Sabrina Bodevin, Lise Tang Petersen, , Birgitte Skadhauge

FIND-IT rapidly identifies and isolates targeted genetic variants in large genomic populations without transformation or cloning.

bioRxiv · May 20, 2021 · PreprintGenetics