Author

S. K. Jagadish

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:differential expression· 1

Frequent Co-Authors

A. R. Leman· 2 shared A. M. Valente· 1 shared A. R. Vennapusa· 1 shared C. Doherty· 1 shared C. J. Doherty· 1 shared D. O. Grinevich· 1 shared I. M. Somayanda· 1 shared J. S. Desai· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersPlant Biology

A. R. Leman

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2 papers

Recent·Most cited

A normalization method that controls for total RNA abundance affects the identification of differentially expressed genes, revealing bias toward morning-expressed responses

K. Laosuntisuk, A. R. Vennapusa, I. M. Somayanda, A. R. Leman, S. K. Jagadish, C. J. Doherty

The paper evaluates how normalization methods affect differential gene expression analysis in sorghum, showing that spike-in controls reveal biases in gene expression related to time of day and chilling stress.

bioRxiv · Oct 28, 2023Plant Biology

Warm nights disrupt global transcriptional rhythms in field-grown rice panicles

J. S. Desai, L. M. F. Lawas, A. M. Valente, A. R. Leman, D. O. Grinevich, S. K. Jagadish, C. Doherty

The paper shows warm nighttime temperatures disrupt transcriptional rhythms in field-grown rice panicles, affecting productivity and identifying regulators involved in sensitivity to temperature changes.

bioRxiv · Jul 16, 2019 · PreprintPlant Biology