Author

S. M. Bell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 3 Cell Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:host-pathogen & immune response· 3 Approach:statistical model· 3 Organism:virus· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1

Frequent Co-Authors

T. Bedford· 3 shared C. Megill· 2 shared A. Infeld· 1 shared A. Predeus· 1 shared A. Shin· 1 shared A. Tarashansky· 1 shared A.-M. Istrate· 1 shared B. Aevermann· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersEvolutionary Biology

T. Bedford

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

CZI Single-Cell Biology, S. Abdulla, B. Aevermann, P. Assis, S. Badajoz, S. M. Bell, E. Bezzi, B. Cakir, J. Chaffer, S. Chambers, J. M. Cherry, T. Chi, J. Chien, L. Dorman, N. Gloria, , Tolop

CZ CELLxGENE Discover provides a platform for scalable exploration and analysis of aggregated single-cell transcriptomic data across multiple studies.

bioRxiv · Oct 30, 2023 · PreprintCell Biology

Dengue antigenic relationships predict evolutionary dynamics

S. M. Bell, L. Katzelnick, T. Bedford

This study identifies specific genetic substitutions and clusters contributing to dengue antigenic diversity and shows their impact on population dynamics and vaccine design.

bioRxiv · Apr 30, 2019 · PreprintEvolutionary Biology

Nextstrain: real-time tracking of pathogen evolution

J. Hadfield, C. Megill, S. M. Bell, J. Huddleston, B. Potter, C. Callender, P. Sagulenko, T. Bedford, R. A. Neher

Nextstrain provides real-time tracking of pathogen evolution by integrating viral genome data with other public health data through a database, bioinformatics pipeline, and visualization platform.

bioRxiv · Nov 22, 2017Evolutionary Biology

Modern-Day SIV viral diversity generated by extensive recombination and cross-species transmission

S. M. Bell, T. Bedford

The paper uses phylogenetic analysis to study SIV recombination and cross-species transmission among primates, identifying 14 novel host switches and varying host-switching abilities across lentiviral lineages.

bioRxiv · Jan 19, 2017Evolutionary Biology