Author

S. Niewieczerzal

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

J. I. Sulkowska· 2 shared A. Kluza· 1 shared E. Flapan· 1 shared E. J. Rawdon· 1 shared F. Bruno da Silva· 1 shared H. Wong· 1 shared I. Lewandowska· 1 shared M. Sikora· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBiophysics

J. I. Sulkowska

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2 papers

Recent·Most cited

Proteins containing 6-crossing knot types andtheir folding pathways

M. Sikora, E. Flapan, H. Wong, P. Rubach, W. Garstka, S. Niewieczerzal, E. J. Rawdon, J. I. Sulkowska

This paper analyzes 6-crossing protein knots using AlphaFold 2 predictions and a coarse-grained model, identifying two distinct folding mechanisms for the 63 knot.

bioRxiv · Jun 16, 2023 · PreprintBiophysics

First crystal structure of double knotted protein TrmD-Tm1570 - inside from degradation perspective

F. Bruno da Silva, I. Lewandowska, A. Kluza, S. Niewieczerzal, R. Augustyniak, J. I. Sulkowska

The paper presents the first crystal structure of a double knotted protein TrmD-Tm1570 and shows it can be degraded by the ClpXP system, with simulations explaining degradation kinetics.

bioRxiv · Mar 13, 2023 · PreprintBiophysics