HLAIIPred: Cross-Attention Mechanism for Modeling the Interaction of HLA Class II Molecules with Peptides
Mojtaba Haghighatlari, Nicholas A. Marze, Robert Seward, Andrew Ciarla, Rachel Hindin, Jennifer Calderini, Benjamin Keenan, Santosh S. Dhule, Sarah Hall-Swan, Timothy Paul Hickling, Eric M. Bennett, K. Brajesh, Sophie Tourdot
HLAIIPred predicts HLAII-presented peptides using a Transformer-based model, outperforming existing methods and identifying core interaction residues.
Communications Biology · Jul 30, 2025Peer-reviewedBioinformatics