Author

Jennifer Calderini

EpiVax (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Assay:proteomics· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Research Focus:perturbation response prediction· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Andrew Ciarla· 2 shared Benjamin Keenan· 2 shared Rachel Hindin· 2 shared Sophie TourdotiD· 2 shared Timothy Paul HicklingiD· 2 shared Christopher S. Lepsy· 1 shared Eric M. BennettiD· 1 shared Gregory S. Steeno· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersImmunology

Andrew Ciarla

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Statistical Methodology for Qualification of a Non-Clinical Risk Assessment Peptide:T Cell Proliferation Assay to Support Decision Making

Sophie Tourdot, Zhiping You, Andrew Ciarla, Rachel Hindin, Benjamin Keenan, Jennifer Calderini, Shea Van den Broek, Christopher S. Lepsy, Timothy Paul Hickling, Gregory S. Steeno

The paper develops a statistical framework to validate a T cell proliferation assay for immunogenicity risk assessment in biologics development.

bioRxiv · Jun 8, 2026 · PreprintImmunology

HLAIIPred: Cross-Attention Mechanism for Modeling the Interaction of HLA Class II Molecules with Peptides

Mojtaba Haghighatlari, Nicholas A. Marze, Robert Seward, Andrew Ciarla, Rachel Hindin, Jennifer Calderini, Benjamin Keenan, Santosh S. Dhule, Sarah Hall-Swan, Timothy Paul Hickling, Eric M. Bennett, K. Brajesh, Sophie Tourdot

HLAIIPred predicts HLAII-presented peptides using a Transformer-based model, outperforming existing methods and identifying core interaction residues.

Communications Biology · Jul 30, 2025Peer-reviewedBioinformatics