Author

Shishir Hebbar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Bowei Han· 2 shared Minzhe ZhangiD· 2 shared Wenbin Guo· 2 shared Wenhao GuiD· 2 shared Xiao Yang· 2 shared Xiaoyuan Zhou· 2 shared Yang LengiD· 2 shared Youjia MaiD· 2 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Bowei Han

Mutual co-authors in cluster

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2 papers

Recent·Most cited

PromptBio: An Agentic Platform for End-to-End Computational Biomedical Research

Minzhe Zhang, Wenhao Gu, Bowei Han, Wenbin Guo, Jiayu Chen, Xiaoyuan Zhou, Yang Leng, Youjia Ma, Kai Li, Junbin Zheng, Shishir Hebbar, Weiying Wang, Aaron Huang, KC Shashidhar, Xiao Yang

PromptBio is an AI platform that translates research objectives into executable workflows, enabling reproducible and adaptable biomedical analyses.

bioRxiv · Sep 6, 2026 · PreprintBioinformatics

PromptBio-Bench: Benchmarking LLM-based Bioinformatics Agents for End-to-End Data Analysis

Wenbin Guo, Minzhe Zhang, Bowei Han, Youjia Ma, Yang Leng, Shishir Hebbar, Xiaoyuan Zhou, Wenhao Gu, Xiao Yang, Shashi Dhar

PromptBio-Bench evaluates LLM-based bioinformatics agents across 244 tasks, showing comparable performance between Biomni and ToolsGenie but declining accuracy with task difficulty.

bioRxiv · Jun 1, 2026 · PreprintBioinformatics