Author

KC Shashidhar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Minzhe ZhangiD· 2 shared Wenhao GuiD· 2 shared Xiao Yang· 2 shared Yang LengiD· 2 shared Youjia MaiD· 2 shared Aaron Huang· 1 shared Bo‐Wei HaniD· 1 shared Bowei Han· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersBioinformatics

Minzhe ZhangORCID

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Author profile →

2 papers

Recent·Most cited

PromptBio: An Agentic Platform for End-to-End Computational Biomedical Research

Minzhe Zhang, Wenhao Gu, Bowei Han, Wenbin Guo, Jiayu Chen, Xiaoyuan Zhou, Yang Leng, Youjia Ma, Kai Li, Junbin Zheng, Shishir Hebbar, Weiying Wang, Aaron Huang, KC Shashidhar, Xiao Yang

PromptBio is an AI platform that translates research objectives into executable workflows, enabling reproducible and adaptable biomedical analyses.

bioRxiv · Sep 6, 2026 · PreprintBioinformatics

ToolsGenie 2.0: A Scalable and Extensible Multi-Agent System for Bioinformatics Automation

Youjia Ma, Bo‐Wei Han, Minzhe Zhang, Yang Leng, Wenhao Gu, KC Shashidhar, Xiao Yang

ToolsGenie 2.0 automates bioinformatics analyses using a multi-agent AI framework, achieving 68.6% accuracy on an in-house dataset and 48.3% on BixBench.

bioRxiv · Jan 7, 2026 · PreprintBioinformatics