Author

Shoko Oda

Institute of Science Tokyo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Sayaka Tominaga· 2 shared Taiko Kim ToiD· 2 shared Tetsuji KakutaniiD· 2 shared Akie Kobayashi· 1 shared Akihisa OsakabeiD· 1 shared Akira KawabeiD· 1 shared Chikae Yamasaki· 1 shared Frédéric BergeriD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenomics

Sayaka Tominaga

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Antagonistic histone H2A variants and autonomous heterochromatin formation shape epigenomic patterns in Arabidopsis

Shoko Oda, Sayaka Tominaga, Shumpei Takeuchi, Akihisa Osakabe, Akira Kawabe, Frédéric Berger, Tetsuji Kakutani, Taiko Kim To

The paper shows that H2A variants guide heterochromatin formation in Arabidopsis, with H2A.W promoting and H2A.Z inhibiting it, while pericentromeric regions form heterochromatin autonomously.

Nature Communications · Jun 30, 2026Peer-reviewedGenomics

Local and global crosstalk among heterochromatin marks drives epigenome patterning in Arabidopsis

Taiko Kim To, Chikae Yamasaki, Shoko Oda, Sayaka Tominaga, Akie Kobayashi, Yoshiaki Tarutani, Tetsuji Kakutani

The paper investigates crosstalk among heterochromatin marks in Arabidopsis, showing that mCG guides mCH establishment and that global negative feedback regulates mCH targeting efficiency.

bioRxiv · Oct 14, 2021 · PreprintGenomics