Author

Simone Olubo

National Institutes of Health

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Organism:non-human primate· 1

Frequent Co-Authors

Chaim A. SchrammiD· 2 shared Daniel C. DouekiD· 1 shared Danny Douek· 1 shared David H. O’ConnoriD· 1 shared Julie A. KarliD· 1 shared Roger W. WisemaniD· 1 shared Trent M. PralliD· 1 shared William S. GibsoniD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 22 mutual co-author links

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2 shared papersImmunology

Chaim A. SchrammORCID

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2 papers

Recent·Most cited

ALIGaToR: A tool for the automated annotation of immunoglobulin and T cell receptor genomic loci

Chaim A. Schramm, Simone Olubo, Daniel C. Douek

ALIGaToR automates the annotation of immunoglobulin and T cell receptor genomic loci by transferring genetic annotations from a reference to a novel assembly, showing accuracy across species.

Oxford Open Immunology · Jan 1, 2025Peer-reviewedImmunology

Multiple full-length homozygous IGH haplotypes from Mauritian cynomolgus macaques

Simone Olubo, William S. Gibson, Trent M. Prall, Julie A. Karl, Roger W. Wiseman, David H. O’Connor, Danny Douek, Chaim A. Schramm

The paper reports the assembly of multiple IGH haplotypes from Mauritian cynomolgus macaques using long-read sequencing, revealing genetic diversity and novel alleles not previously cataloged.

bioRxiv · Nov 27, 2024 · PreprintGenomics