MEDICC2: whole-genome doubling aware copy-number phylogenies for cancer evolution
Tom L. Kaufmann, Marina Petković, Thomas B.K. Watkins, Emma Colliver, Sofya Laskina, Nisha Thapa, Darlan Conterno Minussi, Nicholas E. Navin, Charles Swanton, Peter Van Loo, Kerstin Haase, Maxime Tarabichi, Roland F. Schwarz
MEDICC2 infers cancer phylogenies from copy-number data, accounting for whole-genome doubling and parallel evolution, and performs well on simulated and real datasets.
Genome biology · Nov 14, 2022Peer-reviewedBioinformatics