Mapping active cis-regulatory elements from transcription initiation events
Hjörleifur Einarsson, Natsuda Navamajiti, Christian Vaagensø, Stefano Pellegrini, Lykke Jirström, Nicolás Alcaraz, Malte Thodberg, Daniel Solvie, Wei‐Lin Qiu, Maya U. Sheth, Marta Greedy Escudero, Bram L. Gorissen, Marco Salvatore, Takeya Kasukawa, Hazuki Takahashi, , Robin Andersson
The paper introduces nucCAGE and PRIME to identify active cis-regulatory elements with high sensitivity and applies them to create a cell-type-resolved CRE atlas.
bioRxiv · Jun 23, 2026 · PreprintGenomics