Author

Stephan Marquardt

MSB Medical School Berlin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Athanasia PavlopoulouiD· 2 shared Elif Yildiz· 2 shared Joao Seco· 2 shared Stefan KuhniD· 2 shared Stella LogothetiiD· 2 shared Alexander RebliD· 1 shared Anne-Marie GalowiD· 1 shared Catharina Neßelmann· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersEvolutionary Biology

Athanasia PavlopoulouORCID

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2 papers

Recent·Most cited

An integrative cardio-informatics approach identifies positionally conserved ancestors of human lncRNA genes transcribed across vertebrate hearts

Anne-Marie Galow, Athanasia Pavlopoulou, Elif Yildiz, Stefan Kuhn, Stephan Marquardt, Joao Seco, Oleksandra Chabanovska, Praveen Vasudevan, Catharina Neßelmann, Christian D. Etz, Alexander Rebl, Robert David, Stella Logotheti

The paper identifies conserved genomic positions of human heart-related lncRNA genes across vertebrates using integrative analysis and a neural network tool.

bioRxiv · Oct 24, 2026 · PreprintEvolutionary Biology

In situ vaccine effect of radiotherapy is associated with intratumoural ERV reactivation and RNA virus sensing

Stella Logotheti, Elif Yildiz, Sarah Hasan, Elpida Theodoridou, Stefan Kuhn, Thorsten Stiewe, Stephan Marquardt, Athanasia Pavlopoulou, Joao Seco

This study identifies that radiotherapy-induced antitumor immunity involves ERV reactivation and RNA virus sensing, with SFRT showing stronger immune responses than conventional RT.

bioRxiv · Feb 9, 2026 · PreprintCancer Biology