CellPie: a scalable spatial transcriptomics factor discovery method via joint non-negative matrix factorization
Sokratia Georgaka, William Geraint Morgans, Qian Zhao, Diego Fernando Sanchez, Amin Ali, Mohamed Ghafoor, Syed-Murtuza Baker, Robert Glen Bristow, Mudassar Iqbal, Magnus Rattray
CellPie is a fast, unsupervised method for factor discovery in spatial transcriptomics using joint non-negative matrix factorization, showing improved performance on human cancer datasets.
Nucleic Acids Research · Mar 20, 2025Peer-reviewedBioinformatics