Author

T. Cragnolini

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:protein folding & dynamics· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

J. Beton· 1 shared L. J. Colwell· 1 shared M. P. Brenner· 1 shared M. Topf· 1 shared O. Kimchi· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 4 mutual co-author links

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1 shared paperBiophysics

J. Beton

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2 papers

Recent·Most cited

Cryo-EM structure and B-factorrefinement with ensemble representation

T. Cragnolini, J. Beton, M. Topf

The paper introduces TEMPy-REFF, a method for refining atomic structures in cryo-EM maps using ensemble representations, showing improved fit compared to existing methods.

bioRxiv · Jun 8, 2022Biophysics

RNA structure prediction including pseudoknots through direct enumeration of states

O. Kimchi, T. Cragnolini, M. P. Brenner, L. J. Colwell

This paper introduces a new RNA secondary structure prediction method that accurately predicts pseudoknots by combining a polymer physics model with exhaustive enumeration of possible structures.

bioRxiv · Jun 4, 2018Biophysics