nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling
Sofia Stamouli, Moritz E. Beber, Tanja Normark, Thomas A. Christensen, Lili Li, Maxime Borry, Mahwash Jamy, nf-core community, James A. Fellows Yates
The paper introduces nf-core/taxprofiler, a pipeline for automated metagenomic taxonomic classification and profiling using multiple tools and databases.
bioRxiv · Oct 20, 2023 · PreprintGenomics