Author

Tianqi Chen

Yale UniversityPrimary ORCID profile (0000-0002-8762-9682 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Tianqi CheniD1 paper · Stanford Medicine

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Approach:large language model· 1 Research Focus:polygenic risk· 1

Frequent Co-Authors

Hongyu ZhaoiD· 2 shared Chi ZhangiD· 1 shared Geyu ZhouiD· 1 shared Tianyu LiuiD· 1 shared Wangjie ZhengiD· 1 shared Xiao LuoiD· 1 shared Yiqun T. CheniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersBioinformatics

Hongyu ZhaoORCID

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Author profile →

2 papers

Recent·Most cited

scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis

Tianyu Liu, Tianqi Chen, Wangjie Zheng, Xiao Luo, Yiqun T. Chen, Hongyu Zhao

scELMo uses Large Language Models to analyze single-cell data for clustering, batch correction, and cell-type annotation without retraining, outperforming existing methods.

Patterns · Jan 30, 2026Peer-reviewedBioinformatics

Joint Modeling of Effect Sizes for Two Correlated Traits: Characterizing Trait Properties to Enhance Polygenic Risk Prediction

Chi Zhang, Geyu Zhou, Tianqi Chen, Hongyu Zhao

This study introduces PleioSDPR, a method that improves polygenic risk prediction by jointly modeling genetic effects across correlated traits, showing significant accuracy gains in real trait applications.

PLoS Genetics · Jan 26, 2026Peer-reviewedGenetics