Author

Tido Bergmans

Radboud University Nijmegen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Assay:spatial transcriptomics· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1

Frequent Co-Authors

Tansu CelikeliD· 3 shared Aya Rezeika· 1 shared Bisley J. Kleijnen· 1 shared Chih-Chia Hsing· 1 shared Fleur ZeldenrustiD· 1 shared Natasja DelfstraiD· 1 shared Nicolas Rault· 1 shared Tousif Jamal· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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3 shared papersNeuroscience

Tansu CelikelORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

NeuroCarta: An Automated and Quantitative Approach to Mapping Cellular Networks in the Mouse Brain

Tido Bergmans, Tansu Celikel

NeuroCarta is an open-source MATLAB toolbox that constructs and analyzes brain-wide connectivity networks using the Allen Mouse Brain Connectivity Atlas, revealing a densely connected mouse brain with regional projection variations.

Network Neuroscience · Jan 1, 2025Peer-reviewedNeuroscience

Where top-down meets bottom-up: Cell-type specific connectivity map of the whisker system

Nicolas Rault, Tido Bergmans, Natasja Delfstra, Bisley J. Kleijnen, Fleur Zeldenrust, Tansu Celikel

The paper updates the mouse whisker system connectivity map by identifying new monosynaptic connections and creating the first cell-type-specific map of the network.

Neuroinformatics · May 20, 2024Peer-reviewedNeuroscience

NETSCOPE: Information-Theory Based Network Discovery and Analysis

Tido Bergmans, Tousif Jamal, Aya Rezeika, Chih-Chia Hsing, Tansu Celikel

NETSCOPE infers and analyzes biological networks using information-theoretic methods, validated on synthetic and real data across multiple domains.

bioRxiv · Apr 18, 2022 · PreprintBioinformatics