Precision long-read metagenomics sequencing for food safety by detection and assembly of Shiga toxin-producing Escherichia coli in irrigation water
Meghan Maguire, Julie Ann Kase, Dwayne Roberson, Tim Muruvanda, Eric W. Brown, Marc W. Allard, Steven M. Musser, Narjol González‐Escalona
This paper develops a nanopore sequencing workflow to detect and assemble Shiga toxin-producing E. coli in irrigation water, demonstrating its effectiveness for food safety applications.
PLoS ONE · Jan 14, 2021Peer-reviewedGenomics