Author

Julie Ann Kase

Center for Food Safety and Applied NutritionORCID 0000-0002-5094-7492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:database / resource· 1 Organism:E. coli· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Narjol González‐EscalonaiD· 2 shared Dwayne Roberson· 1 shared Eric W. BrowniD· 1 shared Kranti Konganti· 1 shared Marc W. AllardiD· 1 shared Meghan Maguire· 1 shared Steven M. MusseriD· 1 shared Tim Muruvanda· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Narjol González‐EscalonaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedDec 23, 2025

centriflaken: an automated data analysis pipeline for assembly and in silico analyses of foodborne pathogens from metagenomic samples

Kranti Konganti, Julie Ann Kase, Narjol González‐Escalona

centriflaken automates metagenomic analysis for detecting and characterizing foodborne pathogens like STEC, reducing analysis time and effort.

3 citations

metagenomicsexperimental assay

𝕏 PostBluesky

GenomicsPLoS ONEPeer-reviewedJan 14, 2021

Precision long-read metagenomics sequencing for food safety by detection and assembly of Shiga toxin-producing Escherichia coli in irrigation water

Meghan Maguire, Julie Ann Kase, Dwayne Roberson…·Narjol González‐Escalona

This paper develops a nanopore sequencing workflow to detect and assemble Shiga toxin-producing E. coli in irrigation water, demonstrating its effectiveness for food safety applications.

53 citationstop 2%

E. colimetagenomics

𝕏 PostBluesky