Routine FFPE sections support clinically compatible single-nucleus transcriptomics across six human cancer types
Jasper Wouters, Juliette Bertorello, Marine Gaillard, Baptiste Simon, Sarah Gastineau, Amélie Roehrig, Maud Dupont-Roc, Elise Amblard, Amanda Pupo, Helena Yu, Jean‐Yves Blay, Coralie L. Guérin, Laëtitia Nebot-Bral, Anne Vincent‐Salomon, Loïc Verlingue, , Céline Vallot
This paper develops a workflow for single-nucleus transcriptomics from FFPE tumor samples, showing reproducible cellular composition analysis across six cancer types.
bioRxiv · Jul 28, 2026 · PreprintCancer Biology