Author

Xingqi Hui

Agricultural Genomics Institute at Shenzhen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Jinbao Yang· 2 shared Weihua PaniD· 2 shared Da SuniD· 1 shared Dong XuiD· 1 shared Fei CheniD· 1 shared Haohui Luo· 1 shared Heling JiangiD· 1 shared Huaming Wen· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Jinbao Yang

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2 papers

Recent·Most cited

CentIER: accurate centromere identification for plant genomes with sequence specificity information

Dong Xu, Jinbao Yang, Huaming Wen, Wenle Feng, Xiaohui Zhang, Xingqi Hui, Junyang Yue, Yun Xu, Fei Chen, Weihua Pan

CentIER identifies centromere regions in plant genomes using sequence specificity, achieving over 90% accuracy and providing insights into centromeric retrotransposons and tandem repeats in monocots and dicots.

Plant Communications · Aug 8, 2024Peer-reviewedBioinformatics

Comprehensive Assessment of Eleven de novo HiFi Assemblers on Complex Eukaryotic Genomes and Metagenomes

Wenjuan Yu, Haohui Luo, Jinbao Yang, Shengchen Zhang, Heling Jiang, Xianjia Zhao, Xingqi Hui, Da Sun, Liang Li, Xiu-qing Wei, Stefano Lonardi, Weihua Pan

This study benchmarks eleven HiFi assemblers on eukaryotic genomes and metagenomes, finding Hifiasm superior for complex genomes and Hifiasm-meta for metagenomes.

Genome Research · Feb 1, 2024Peer-reviewedGenomics