Yen‐Jen Oyang

This study develops a deep learning model to predict enhancer activity in new cell types by integrating DNase data across multiple cell types.

GenEpi detects gene-based epistasis using machine learning, outperforming existing methods on simulated data and identifying disease-related variants in Alzheimer's disease.

This study evaluates how de novo transcriptome assembly quality affects RNA-Seq quantification accuracy and introduces a tool to assess quantification results.