Author

Yixuan Xie

University of Wisconsin–MadisonPrimary ORCID profile (0000-0002-8512-6053 · 10 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Yixuan XieiD10 papers · Washington University in St. Louis

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:large language model· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Akash GOGATE· 1 shared Christina M. KendziorskiiD· 1 shared Jack M. ShiremaniD· 1 shared Lingxin ChengiD· 1 shared Maggie Stangis· 1 shared Mahua DeyiD· 1 shared P. KhatriiD· 1 shared Yujia CaiiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Akash GOGATE

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Author profile →

1 paper

Recent·Most cited

Agentic Discovery Transfer Enables Cross-Cancer Discovery at Scale

Lingxin Cheng, Jack M. Shireman, Akash GOGATE, Maggie Stangis, Yujia Cai, Yixuan Xie, P. Khatri, Mahua Dey, Christina M. Kendziorski

SMART, a multi-agent framework, transfers findings from single-cell RNA-sequencing cancer studies to other cancer types, identifying cross-cancer prognostic signatures and generating new hypotheses.

bioRxiv · Oct 29, 2026 · PreprintBioinformatics