Muzi Li

The paper introduces FveOCRs, a database that predicts open chromatin regions in wild strawberry using a large language model, and allows predictions for any plant species.

GeTallele estimates and compares variant read probabilities in DNA and RNA sequencing data to assess allele asymmetries and genomic events.

This paper presents the first draft genome assembly and annotation of the red raspberry Rubus idaeus, providing a valuable resource for research and breeding.

The paper introduces ReQTL, an eQTL analysis method using RNA genetic variation instead of DNA genotypes, showing high performance in identifying molecular associations from RNA-sequencing data.