Author

Rüdiger Bräuning

AgResearchORCID 0000-0001-5068-9166Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:statistical model· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

Shannon ClarkeiD· 3 shared John Colin McEwaniD· 2 shared K. G. DoddsiD· 2 shared Suzanne J. RoweiD· 2 shared Tracey C. van StijniD· 2 shared Adam M. PhillippyiD· 1 shared Ahmed TibaryiD· 1 shared Arang RhieiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersGenetics

Shannon ClarkeORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Bighorn sheep T2T genome assembly reveals differences in immune genes: a potential cause of high morbidity due to respiratory pathogens

Temitayo Olagunju, Mariia Pospelova, John C. Schwartz, Michelle R. Mousel, Lindsay M. W. Piel, Paige C. Grossman, Kathryn P. Huyvaert, Kristen L. Kuhn, Tajbir Raihan, Morgan R Stegemiller, Sarem F. Khilji, Gordon K. Murdoch, Ahmed Tibary, Lisette P. Waits, Arang Rhie, , Brenda M. Murdoch

This paper presents a telomere-to-telomere genome assembly of bighorn sheep, revealing immune gene differences that may explain their susceptibility to respiratory pathogens.

bioRxiv · Sep 30, 2025 · PreprintGenomics

Exclusion and genomic relatedness methods for assignment of parentage using genotyping-by-sequencing data

K. G. Dodds, John Colin McEwan, Rüdiger Bräuning, Tracey C. van Stijn, Suzanne J. Rowe, Kirsty McEwan, Shannon Clarke

The paper develops methods to assign parentage using low-depth sequencing data by combining relatedness estimates and excess mismatch rate metrics, showing consistency with microsatellite results.

G3 Genes Genomes Genetics · Aug 5, 2019Peer-reviewedGenetics

Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data

Timothy P. Bilton, John Colin McEwan, Shannon Clarke, Rüdiger Bräuning, Tracey C. van Stijn, Suzanne J. Rowe, K. G. Dodds

This paper develops a method to accurately estimate linkage disequilibrium from low coverage sequencing data by accounting for under-called heterozygous genotypes.

Genetics · Mar 26, 2018Peer-reviewedGenetics