Author

William L. Murphy

University of Wisconsin–MadisonORCID 0000-0001-5577-7739Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Amgad Hanna· 1 shared Archana PrabahariD· 1 shared Asma EslamiiD· 1 shared Barsanjit MazumderiD· 1 shared Bryan N. BrowniD· 1 shared Connie S. ChamberlainiD· 1 shared Daniel J. HellenbrandiD· 1 shared Jacobus Burger· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperNeuroscience

Amgad Hanna

Mutual co-authors in cluster

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintJun 9, 2026

Intravenously Delivered Lipid Nanoparticles Access Acute Spinal Cord Injury via Disrupted Vasculature

Jacobus Burger, Luke J. Bolstad, Mia J. LaRico…·Daniel J. Hellenbrand

This study shows that intravenously delivered mRNA-lipid nanoparticles can access the injured spinal cord via disrupted blood-spinal cord barrier, achieving local transgene expression in multiple cell types.

DOI 10.64898/2026.06.04.730155

ratexperimental assay

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Developmental BiologybioRxivPreprintDec 4, 2024

Transcriptomic Landscape and Immune Microenvironment AroundWound Bed Define Regenerative versus Non-regenerative Outcomesin Mouse Digit Amputation

Archana Prabahar, Connie S. Chamberlain, Ray Vanderby…·Peng Jiang

The paper investigates regenerative versus non-regenerative outcomes after mouse digit amputation by analyzing the wound bed's transcriptomic landscape and immune microenvironment, identifying key transcription factors and developing a predictive AI model.

1 citation

mousebulk RNA-seq

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