Mariam Ait Oumelloul

The paper integrates multi-omics data from pediatric sepsis patients to identify a reproducible inflammatory host-response axis associated with disease severity.

The paper introduces a framework for defining and reusing qualifying variants (QVs) in genomic analysis to improve transparency, reproducibility, and interoperability across pipelines.

The paper introduces the Archipelago method to visualize variant set association test statistics by assigning genomic coordinates to P values, enabling combined visualization of set-level and individual variant associations.

G2GSnake provides a Snakemake workflow and R Shiny app for reproducible genome-to-genome association studies between host and pathogen genomes.