Author

Lorena Azevedo de Lima

University of TartuORCID 0000-0001-5735-035XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Assay:metabolomics· 1 Assay:metagenomics· 1

Frequent Co-Authors

Audrey Harris· 3 shared Kaspar ValgepeaiD· 3 shared Kristina ReinmetsiD· 3 shared Michael KöpkeiD· 3 shared Esteban MarcelliniD· 2 shared Craig P. BarryiD· 1 shared Henri Ingelman· 1 shared Kurshedaktar Majibullah ShaikhiD· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersSystems Biology

Audrey Harris

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Deletion of genes linked to the C1-fixing gene cluster affects growth, by-products, and proteome of Clostridium autoethanogenum

Ugochi Jennifer Nwaokorie, Kristina Reinmets, Lorena Azevedo de Lima, Pratik Rajendra Pawar, Kurshedaktar Majibullah Shaikh, Audrey Harris, Michael Köpke, Kaspar Valgepea

This study investigates the effects of deleting two genes linked to the C1-fixing gene cluster in Clostridium autoethanogenum, revealing growth defects and altered by-product profiles.

Frontiers in Bioengineering and Biotechnology · May 15, 2023Peer-reviewedSynthetic Biology

RNA-seq sample preparation kits strongly affect transcriptome profiles of a gas-fermenting bacterium

Lorena Azevedo de Lima, Kristina Reinmets, Lars Keld Nielsen, Esteban Marcellin, Audrey Harris, Michael Köpke, Kaspar Valgepea

This paper compares RNA-seq library preparation kits for a gas-fermenting bacterium, finding significant differences in transcriptome profiles and highlighting the importance of selecting appropriate kits for accurate results.

Microbiology Spectrum · Jul 27, 2022Peer-reviewedSystems Biology

Faster growth enhances low carbon fuel and chemical production through gas fermentation

Lorena Azevedo de Lima, Henri Ingelman, Kush Brahmbhatt, Kristina Reinmets, Craig P. Barry, Audrey Harris, Esteban Marcellin, Michael Köpke, Kaspar Valgepea

This study shows that faster growth of Clostridium autoethanogenum improves gas fermentation yields and productivities for ethanol and 2,3-butanediol.

Frontiers in Bioengineering and Biotechnology · Apr 12, 2022Peer-reviewedSystems Biology