Author

Riccardo Ziraldo

The University of Texas at DallasORCID 0000-0001-6144-9416Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:deconvolution· 1 Assay:DNA methylation· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Stephen D. LeveneiD· 2 shared Andreas HankeiD· 1 shared Andrew Z. FireiD· 1 shared Massa J. ShouraiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersGenomics

Stephen D. LeveneORCID

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2 papers

Recent·Most cited

GenomicsNucleic Acids ResearchPeer-reviewedJun 6, 2019

Deconvolution of Nucleic-acid Length Distributions: A Gel Electrophoresis Analysis Tool and Applications

Riccardo Ziraldo, Massa J. Shoura, Andrew Z. Fire, Stephen D. Levene

The paper introduces a software tool for analyzing DNA fragment size distributions using gel electrophoresis images, offering a cost-effective alternative to commercial systems.

15 citations

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

Molecular BiologyNucleic Acids ResearchPeer-reviewedNov 2, 2018

Kinetic Pathways of Topology Simplification by Type-II Topoisomerases in Knotted Supercoiled DNA

Riccardo Ziraldo, Andreas Hanke, Stephen D. Levene

The paper uses numerical simulations to study how type-II topoisomerases simplify DNA topology in supercoiled molecules, finding enhanced activity under constant torsional tension.

24 citations

statistical model

𝕏 PostBluesky