Author

Srikar Chamala

Children's Hospital Los AngelesORCID 0000-0001-6367-7615Unclaimed ORCID profile · follow to get notified of new preprints

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Srikar Chamala1 paper

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1 Organism:plant (other)· 1

Frequent Co-Authors

Alejandra Chacón-LópeziD· 1 shared Alejandro F. Barrientos-PriegoiD· 1 shared Alejandro Sánchez‐GraciaiD· 1 shared Alex Handler WagneriD· 1 shared Alfonso Méndez‐BravoiD· 1 shared Alfredo Herrera‐EstrellaiD· 1 shared Alice C. HaywardiD· 1 shared Anastasia L. SmithiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alejandra Chacón-LópezORCID

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2 papers

Recent·Most cited

BioinformaticsPacific Symposium on Biocomputing (PSB)Peer-reviewedNov 1, 2022

Development and application of a computable genotype model in the GA4GH Variation Representation Specification

Wesley Goar, Lawrence J. Babb, Srikar Chamala…·Alex Handler Wagner

The paper develops and applies a computable genotype model within the GA4GH Variation Representation Specification to enable precise and interoperable representation of genomic variation data.

4 citationstop 1%

whole-genome sequencingstatistical model

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GenomicsProceedings of the National Academy of SciencesPeer-reviewedAug 6, 2019

The Avocado Genome Informs Deep Angiosperm Phylogeny, Highlights Introgressive Hybridization, and Reveals Pathogen Influenced Gene Space Adaptation

Martha Rendón‐Anaya, Enrique Ibarra‐Laclette, Alfonso Méndez‐Bravo…·Luís Herrera‐Estrella

This paper presents the avocado genome, revealing its phylogenetic position, introgressive hybridization, and pathogen-driven gene space adaptation.

198 citationstop 1%

plant (other)whole-genome sequencing

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