Author

Shola Able-Thomas

London School of Hygiene & Tropical MedicineORCID 0000-0001-6383-6225Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Dam KhaniD· 2 shared Ebenezer Foster-NyarkoiD· 2 shared Kathryn E. HoltiD· 2 shared A. Peyton SmithiD· 1 shared Abdoulie KantehiD· 1 shared Abdoullah NyassiiD· 1 shared Abdul Karim Ceesay· 1 shared Abdul Karim SesayiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersMicrobiology

Dam KhanORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 5, 2026

Upper respiratory tract bacterial microbiome features associated with Streptococcus pneumoniae colonisation, environmental and demographic factors among older children in a rural setting in The Gambia

Dam Khan, Brenda Kwambana-Adams, Peggy Estelle Tientcheu…·Martín Antonio

The study examines URT microbiome features linked to S. pneumoniae colonisation in older children in The Gambia, identifying microbial associations and environmental factors influencing colonisation.

DOI 10.64898/2026.10.04.756419

humanmetagenomics

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Genetic & Genomic MedicinemedRxivPreprintMar 4, 2026

Molecular characterisation of a Klebsiella pneumoniae neonatal sepsis outbreak in a rural Gambian hospital: a retrospective genomic epidemiology investigation

Ebenezer Foster-Nyarko, Alasana Bah, Williams Oluwatosin Adefila…·Grant Austin Mackenzie

This study uses whole-genome sequencing to characterize a multidrug-resistant Klebsiella pneumoniae outbreak in a Gambian hospital, identifying the outbreak strain and its environmental sources.

DOI 10.64898/2026.03.03.26347025

bacteria (other)whole-genome sequencing

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GenomicsMicrobial GenomicsPeer-reviewedDec 5, 2025

Genomic Diversity and Antimicrobial Resistance of Vibrio cholerae Isolates from Africa: A PulseNet Africa Initiative Using Nanopore Sequencing to Enhance Genomic Surveillance

Ebenezer Foster-Nyarko, Shola Able-Thomas, Nana Eghele Adade…·PulseNet Africa

This study uses whole-genome sequencing of Vibrio cholerae isolates from Africa to assess genomic diversity and antimicrobial resistance, highlighting the utility of WGS for enhanced surveillance.

6 citations

humanwhole-genome sequencing

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