Author

Katrina N. Lyon

Montana State UniversityORCID 0000-0001-6414-604XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alexis BurchamiD· 1 shared Barkan SidariD· 1 shared Bret H. DavisiD· 1 shared Brian A. Boone· 1 shared Cameron Dudiak· 1 shared Chloe Vermulm· 1 shared Diane BimczokiD· 1 shared Grace Jordan· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCell Biology

Alexis BurchamORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cell BiologyAmerican Journal of Physiology-Gastrointestinal and Liver PhysiologyPeer-reviewedJul 16, 2026

Physical, chemical, and structural properties of human gastric organoid-derived mucus

Katrina N. Lyon, Barkan Sidar, Jasper Gattiker…·Diane Bimczok

This study demonstrates that bioengineered gastric mucus from human gastric organoids closely mimics native human gastric mucus in structure, function, and proteomic profile.

DOI 10.1152/ajpgi.00001.2026

humanproteomics

𝕏 PostBluesky

BioinformaticsbioRxivPreprintSep 18, 2020

DeepPPPred: An Ensemble of BERT, CNN, and RNN for Classifying Co-mentions of Proteins and Phenotypes

Morteza Pourreza Shahri, Katrina N. Lyon, Julia Schearer, Indika Kahanda

DeepPPPred combines BERT, CNN, and RNN with PPPred to classify protein-phenotype co-mentions, achieving state-of-the-art performance on an expanded gold-standard dataset.

12 citations

humanproteomics

𝕏 PostBluesky