Author

Akash Patel

University of PittsburghORCID 0000-0001-6616-8007Unclaimed ORCID profile · follow to get notified of new preprints

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Akash Patel2 papers · Baylor College of Medicine

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Systems Biology· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:mouse· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alisa A. OmelchenkoiD· 1 shared Alok V. JoglekariD· 1 shared AnnaElaine RosengartiD· 1 shared David Ryan KoesiD· 1 shared Iliyan Nazarali· 1 shared Jane C SiwekiD· 1 shared Javad RahimikolluiD· 1 shared Jeremy S. TilstraiD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperSystems Biology

Alisa A. OmelchenkoORCID

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1 paper

Recent·Most cited

Systems BiologyNature MethodsPeer-reviewedJul 28, 2025

Sliding Window INteraction Grammar (SWING): a generalized interaction language model for peptide and protein interactions

Jane C Siwek, Alisa A. Omelchenko, Prabal Chhibbar…·Jishnu Das

SWING is a novel interaction language model that predicts peptide:MHC interactions and protein-protein interaction disruptions using sequence data.

27 citationstop 1%

mouseprotein sequence

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