Alisa A. Omelchenko

This study identifies a core gene program underlying Tfh cell differentiation using a multi-scale network systems approach, revealing a novel role for IL-12 in regulating Tfh precursor differentiation.

SWING is a novel interaction language model that predicts peptide:MHC interactions and protein-protein interaction disruptions using sequence data.

The paper introduces TACI, an ImageJ plugin for analyzing 3D calcium imaging data, improving reproducibility and reducing human bias without requiring coding.

The paper develops a transfer-learning U-Net model for brain extraction in non-human primates using human data, achieving better performance than traditional methods and popular MRI packages.