Rashedul Islam

ProtSEC provides fast and accurate protein sequence embeddings using complex numbers and FFT, achieving significant speed and memory improvements over PLMs.

VirusTaxo classifies virus genomes into taxonomic ranks using k-mer enrichment and hierarchical classification, achieving high accuracy for DNA and RNA viruses.

This study evaluates the impact of different assemblers on SARS-CoV-2 genome assembly quality and variant detection, showing significant differences in assembly outcomes and variant characterization.