Author

Lior Shachaf

Johns Hopkins UniversityORCID 0000-0001-6827-8605Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

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Elijah RobertsiD· 1 shared Jie XiaoiD· 1 shared Patrick CahaniD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Elijah RobertsORCID

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1 paper

Recent·Most cited

BioinformaticsBMC BioinformaticsPeer-reviewedMar 6, 2023

Gene regulation network inference using k-nearest neighbor-based mutual information estimation- Revisiting an old DREAM

Lior Shachaf, Elijah Roberts, Patrick Cahan, Jie Xiao

This paper improves gene regulatory network reconstruction by combining a new algorithm with a k-nearest neighbor mutual information estimator, achieving better precision-recall performance on synthetic datasets.

11 citations

bulk RNA-seqstatistical model

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