Author

Katherine Eason

Institute of Cancer ResearchORCID 0000-0001-6903-9067Unclaimed ORCID profile · follow to get notified of new preprints

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Research Focus:clustering· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Anguraj SadanandamiD· 2 shared Gift Nyamundanda· 2 shared Cameron C. YoungiD· 1 shared Carlos CaldasiD· 1 shared Oscar M. RuedaiD· 1 shared Raquel Manzano GarcíaiD· 1 shared Richard MoulangeiD· 1 shared Sach MukherjeeiD· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 22 mutual co-author links

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2 shared papersGenomics

Anguraj SadanandamORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintNov 21, 2023

Development and validation of a reliable DNA copy-number-based machine learning algorithm (CopyClust) for breast cancer integrative cluster classification

Cameron C. Young, Katherine Eason, Raquel Manzano García…·Oscar M. Rueda

CopyClust improves breast cancer subtype classification using DNA copy number data alone, achieving higher accuracy than existing methods.

DOI 10.1101/2023.11.21.568129

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsBMC BioinformaticsPeer-reviewedMay 25, 2018

polyCluster: Defining Communities of Reconciled Cancer Subtypes with Biological and Prognostic Significance

Katherine Eason, Gift Nyamundanda, Anguraj Sadanandam

polyCluster reconciles cancer subtypes from different clustering methods to identify prognostically significant subtype communities in breast and uveal melanoma datasets.

2 citations

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintAug 11, 2017

A Next Generation Clustering Tool Enables Identification of Functional Cancer Subtypes with Associated Biological Phenotypes

Gift Nyamundanda, Katherine Eason, Anguraj Sadanandam

The paper introduces a tool called phenMap that integrates clustering, phenotype association, and biomarker identification to define functional cancer subtypes with biological phenotypes.

DOI 10.1101/175307

humanbulk RNA-seq

𝕏 PostBluesky