Author

Rasmus Plenge Waagepetersen

Aalborg UniversityORCID 0000-0001-6911-0089Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:plant (other)· 1

Frequent Co-Authors

Ib Thorsgaard JenseniD· 2 shared Simona RadutoiuiD· 2 shared Anna MartyniD· 1 shared Bent Tolstrup ChristenseniD· 1 shared Camilla Lind SalomonseniD· 1 shared Giles E. D. OldroydiD· 1 shared Harm DingsiD· 1 shared Ke TaoiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersPlant Biology

Ib Thorsgaard JensenORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintMay 9, 2026

The common symbiosis pathway controls plant root microbiomes in a host-specific manner

Anna Martyn, Ib Thorsgaard Jensen, Camilla Lind Salomonsen…·Simona Radutoiu

This study shows that the Common Symbiosis Signalling Pathway (CSSP) regulates root microbiome assembly in a host-specific manner across two plant species, with distinct taxonomic outcomes linked to host metabolic differences.

DOI 10.64898/2026.05.08.723321

plant (other)metagenomics

𝕏 PostBluesky

BioinformaticsPLoS ONEPeer-reviewedJun 28, 2024

Compositionally aware estimation of cross-correlations for microbiome data

Ib Thorsgaard Jensen, Luc Janss, Simona Radutoiu, Rasmus Plenge Waagepetersen

This paper introduces SparCEV and SparXCC to estimate cross-correlations between microbiome OTUs and external variables, showing they outperform naive transformations in certain scenarios.

10 citations

metagenomicsstatistical model

𝕏 PostBluesky