Joshua B. Singer

This paper introduces a lineage classification system for rabies virus based on SARS-CoV-2 nomenclature, enabling high-resolution tracking of viral spread and improving disease control.

GLUE is a flexible software system for organizing and processing virus sequence data, demonstrated with a hepatitis C virus case study.

This study investigates the origins and spread of small ruminant lentiviruses using genomic data, finding no clear evidence that the Fertile Crescent was the pandemic origin but suggesting historical breed exports may have contributed to disease emergence.