Author

Ashwin Narayan

Broad InstituteORCID 0000-0001-7024-9424Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Bonnie BergeriD· 2 shared Brian HieiD· 1 shared Hyunghoon ChoiD· 1 shared Rohit SinghiD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

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4 top collaborators · 4 mutual co-author links

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2 shared papersBioinformatics

Bonnie BergerORCID

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2 papers

Recent·Most cited

BioinformaticsGenome biologyPeer-reviewedMay 3, 2021

Metric learning enables synthesis of heterogeneous single-cell modalities

Rohit Singh, Brian Hie, Ashwin Narayan, Bonnie Berger

The paper introduces Schema, a metric learning algorithm that synthesizes heterogeneous single-cell modalities to infer cell types, analyze gene expression, and estimate evolutionary pressure.

44 citations

scRNA-seqscATAC-seq

𝕏 PostBluesky

BioinformaticsNature BiotechnologyPeer-reviewedJan 18, 2021

Density-Preserving Data Visualization Unveils Dynamic Patterns of Single-Cell Transcriptomic Variability

Ashwin Narayan, Bonnie Berger, Hyunghoon Cho

The paper introduces density-preserving visualization methods den-SNE and densMAP for single-cell RNA-seq data, revealing new insights into transcriptomic variability in biological processes.

204 citationstop 1%

humanC. elegans

𝕏 PostBluesky