Author

Damir Zhakparov

SIB Swiss Institute of BioinformaticsORCID 0000-0001-7175-0843Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:flow cytometry· 1

Frequent Co-Authors

Katja BaerenfalleriD· 2 shared Abhijeet J. KulkarniiD· 1 shared Alma VillaseñoriD· 1 shared Andrzej EljaszewicziD· 1 shared Anja HeideriD· 1 shared Antonio J. García-CívicoiD· 1 shared Berta Ruiz-LeóniD· 1 shared Carmela Pablo‐TorresiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersImmunology

Katja BaerenfallerORCID

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2 papers

Recent·Most cited

L-Phenylalanine is a metabolic checkpoint of human Th2 cells

Abhijeet J. Kulkarni, Juan Rodríguez‐Coira, Nino Stocker, Urszula Radzikowska, Antonio J. García-Cívico, María Isabel Delgado Dolset, Nuria Contreras, Inés Jardón Parages, Vanesa Saiz Sanchez, Pilar Serrano, Elena Izquierdo, Cristina Gómez‐Casado, Javier Sánchez‐Solares, Carmela Pablo‐Torres, David Obeso, , Milena Sokołowska

This study identifies L-phenylalanine as a metabolic checkpoint regulating Th2 cell development, energy metabolism, and function in allergy.

Cell Reports Medicine · Nov 26, 2025Peer-reviewedImmunology

GeneSelectR: An R Package Workflow for Enhanced Feature Selection from RNA Sequencing Data

Damir Zhakparov, Kathleen Moriarty, Damian Roqueiro, Katja Baerenfaller

GeneSelectR is an R package that integrates machine learning and bioinformatics for feature selection in RNAseq data, prioritizing biologically relevant features through ML performance and GO analysis.

bioRxiv · Jan 22, 2024 · PreprintBioinformatics