Author

Stijn Vanderzande

Washington State UniversityORCID 0000-0001-7206-7421Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:plant (other)· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Assay:GWAS summary statistics· 1

Frequent Co-Authors

Cameron PeaceiD· 3 shared Eric W. Van De WegiD· 2 shared Alexander SchalleriD· 1 shared Amy F IezzoniiD· 1 shared Cássia da Silva LingeiD· 1 shared Johannes W. KruisselbrinkiD· 1 shared Ksenija GašićiD· 1 shared Laima Antanaviciute· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersGenetics

Cameron PeaceORCID

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3 papers

Recent·Most cited

GeneticsbioRxivPreprintAug 8, 2024

Whole genome sequence improvement with pedigree information and reference genotypic profiles, demonstrated in outcrossing apple

Stijn Vanderzande, Cameron Peace, Eric W. Van De Weg

The paper improves whole genome sequence quality using pedigree information and reference genotypic profiles, demonstrating the approach in apple genomes.

4 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky

GeneticsPLoS ONEPeer-reviewedFeb 7, 2023

Deducing genotypes for loci of interest from SNP array data via haplotype sharing, demonstrated for apple and cherry

Alexander Schaller, Stijn Vanderzande, Cameron Peace

The paper develops a method to deduce genotypes at specific loci from SNP array data using haplotype sharing, validated in apple and cherry breeding programs.

4 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky

GeneticsPLoS ONEPeer-reviewedJun 27, 2019

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

Stijn Vanderzande, Nicholas P. Howard, Lichun Cai…·Cameron Peace

The paper develops a workflow to generate high-quality SNP genotypic data for apple, peach, and sweet cherry using pedigree records and inheritance principles, resulting in curated haploblock data sets.

106 citationstop 1%

GWAS summary statisticsstatistical model

𝕏 PostBluesky